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Features

QTL Analysis

Real time QTL Analysis can be performed with an interactive genome wide LOD plot

Mediation Analysis

The Mediation analysis is used to identify possible candidate mediators. This function runs a mediation analysis which is based on conditioning the QTL into the genotype probabilities of each gene, so the most promisor candidates are the ones that cause a higher drop of the QTL LOD score when using the conditioned model

SNP Association

SNP association analysis can be performed to show the SNP LOD scores on top and the genes located on the corresponding genomic positions on the bottom

Technology

We utilize the following technologies...

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Python

The Web Framework

Python

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R

Number crunching and analysis

R

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Docker

Container to run anywhere

Docker

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Bootstrap

Fluid HTML Layout

Bootstrap

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